Dominic Winter


Dominic Winter

PI of Research Project 8:
“Quantitative determination of the effect of transcription factors TFEB and TFE3 on the expression of lysosomal proteins”



Dr. Dominic Winter

Universität Bonn
Institut für Biochemie und Molekularbiologie
Nussallee 11
D-53115 Bonn

phone: +49 (0) 228 73 7081
fax: +49 (0) 228 73 2416
website Winter Group




Co-regulation proteomics reveals substrates and mechanisms of APC/C-dependent degradation. Singh S*, Winter D*, Kirchner M*, Chauchan R*, Ahmed S, Ozlu N, Tzur A, Steen JA, Steen H (2014) EMBO J 33:385-99 (*equal contribution)

Optimization of cell lysis and protein digestion protocols for the analysis of HeLa S3 cells by LC-MS/MS. Winter D, Steen H (2011) Proteomics 11:4726-30

Citrate Boosts the Performance of Phosphopeptide Analysis by UPLC-ESI-MS/MS. Winter D, Seidler J, Ziv Y, Shiloh Y, Lehmann WD (2009) J Prot Res 8:418-24

FLEXIQinase, a mass spectrometry-based assay, to unveil multikinase mechanisms. Singh S, Winter D, Bilimoria P, Bonni A, Steen H, Steen JA (2012) Nat Methods 9:504-9

PINK1 and Parkin Target Miro for Phosphorylation and Degradation to Arrest Mitochondrial Motility. Wang X, Winter D, Ashrafi G, Schlehe J, Wong YL, Selkoe D, Rice S, Steen J, Lavoie MJ, Schwarz TL (2011) Cell 147:893-906

Simultaneous Identification and Quantification of Proteins by Differential O-16/O-18 Labeling and UPLC-MS/MS Applied to Mouse Cerebellar Phosphoproteome Following Irradiation. Winter D, Seidler J, Ziv-Lehrman S, Shiloh Y, Lehmann WD (2009) Anticancer Res 29:4949-58

Minimally permutated peptide analogs as internal standards for relative and absolute quantification of peptides and proteins. Winter D*, Seidler J*, Kugelstadt D, Derrer B, Kappes B, Lehmann WD (2010) Proteomics 10:1510-4 (*equal contribution)

Enzyme-cleavable tandem peptides for quantitative studies in MS-based proteomics. Winter D*, Hung CW*, Jaskolla TW, Karas M, Lehmann WD (2012) Proteomics 12:3470-4 (*equal contribution)

Quantitative profiling of peptides from RNAs classified as noncoding. Prabakaran S, Hemberg M, Chauhan R, Winter D, Tweedie-Cullen RY, Dittrich C, Hong E, Gunawardena J, Steen H, Kreiman G, Steen JA (2014) Nat Commun 5:5429

Protein phosphorylation influences proteolytic cleavage and kinase substrate properties exemplified by analysis of in vitro phosphorylated Plasmodium falciparum glideosome-associated protein 45 by nano-ultra performance liquid chromatography-tandem mass spectrometry. Winter D, Kugelstadt D, Seidler J, Kappes B, Lehmann WD (2009) Anal Biochem 393:41-7